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The installer attempted to install the files into system32 so i changed it to SysWoW64 folder, the files are all there and NOT in system32.

When I run the OpenSSL installer here under Windows 7 64bit, the installer defaults to the folder System32, which is correct. That is what it should do. It is Windows itself that translates this automatically to SysWoW64. I have tested this under three different computers with Windows 7 64bit and they all behave the same way, so I am not sure why your Windows installation is behaving differently. Perhaps someone else on the forums can test this out as well to see if they can reproduce this with the OpenSSL installer.