Well man you have too many issues so the only solution is to delete all of your old code and paste this one, if this will not work then you have not delete all of your old code correctly.

Code:
on *:TEXT:Hi:* { msg $chan Yo $nick FrankerZ / }
on *:TEXT:Hello:* { msg $chan Yo $nick RalpherZ / }

ON *:TEXT:*:#: {
  tokenize 32 $strip($1-,burci)
  if ($1 == !permit) {
    if ($nick isop #) && ($2) {
      var %rn = $read(reglist.txt,nw,$2)
      if (%rn) { msg $chan [ $+ $nick $+ ]: Error, This user is already into the list! | return }
      write reglist.txt $2
      msg # $2 has been permited to post a link for 20 seconds.
      .timer[RemovePermit_ $+ $2 $+ ] 1 20 RemovePermit # $2
    }
  }
  if ($nick isop #) { return }
  if ($len($1-) >= 10 ) {
    if ( $calc($regex($1-,/[A-Z]/g) / $regex($1-,/[A-Z]/gi) * 100) >= 45 ) {
      if !$istok(%caps.warned,$nick,32) {
        msg $chan $nick -> Kappa not caps! [warning]
        set -e %caps.warned $addtok(%caps.warned,$nick,32)
        .timer 1 300 remove.warned $nick
      }
      else msg $chan Caps again frown | msg $chan .timeout $nick 60
    }
  }
  if ($isurl($1-)) {
    var %rn = $read(reglist.txt,nw,$nick)
    if (!%rn) { kick $chan $nick [WARNING]: You are NOT allowed to post links here. }
  }
}

alias removepermit {
  if (!$1-) { return }
  var %rn = $read(reglist.txt,nw,$2)
  var %rnum = $readn
  if (%rn) { write -dl $+ %rnum reglist.txt }
}

alias isurl {
  var %url = /(?:ftp:\/\/|https?:\/\/|www2?\.)[^<>\.\s]+(?:\.[^<>\.\s]+)+(?:\/[^<>\.\s]+)*|irc:\/\/[^<>\.\s]+(?:\.[^/<>\.\s]+)+(?:\/[^/<>\.\s]*)?\/?(?![^\s\x2c\.])|aim:goim\?screenname=[^\s&]+(?:&message=[^\s&=]+)?/
  return $regex($1,%url)
}

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